🔧

PyMOL-MCP

🔧MCP Server

jonathan6620/pymol-mcp

glama

Installation

Claude CLIAdd MCP server via Claude CLIAuto-generated from README. View full documentation on GitHub →

claude mcp add pymol -s user -- uv --directory $(pwd) run --frozen pymol-mcp

Claude CLIAdd MCP server via Claude CLI

claude mcp add pymol -s user -- uv --directory /path/to/pymol-mcp run --frozen pymol-mcp

Claude CLIAdd MCP server via Claude CLI

claude mcp add

Claude Desktop ConfigurationServer configuration (JSON)

{
  "mcpServers": {
    "pymol": {
      "command": "[Full path to uv]",
      "...

Last UpdatedJul 23, 2026