Collection325 items

gptomics/bioskills

173stars

🎯Skills325

🎯bio-flow-cytometry-clustering-phenotyping🎯Skill

Performs automated clustering and phenotyping of flow cytometry data, identifying and characterizing distinct cell populations based on multi-parameter immunophenotyping measurements.

bio-flow-cytometry-clustering-phenotyping

🎯bio-methylation-calling🎯Skill

Identifies and quantifies DNA methylation patterns from sequencing data, enabling precise mapping of epigenetic modifications across genomic regions.

bio-methylation-calling

🎯bio-read-alignment-star-alignment🎯Skill

bio-read-alignment-star-alignment skill from gptomics/bioskills

bio-read-alignment-star-alignment

🎯bio-genome-assembly-contamination-detection🎯Skill

Detects and filters out potential contaminating sequences during genome assembly by identifying foreign DNA or microbial sequences that may have been inadvertently included during sequencing and as...

bio-genome-assembly-contamination-detection

🎯bio-data-visualization-multipanel-figures🎯Skill

Generates publication-quality multipanel scientific figures by automatically arranging, scaling, and labeling multiple plots or images with customizable layouts and consistent styling.

bio-data-visualization-multipanel-figures

🎯bio-data-visualization-genome-tracks🎯Skill

bio-data-visualization-genome-tracks skill from gptomics/bioskills

bio-data-visualization-genome-tracks

🎯bio-read-qc-fastp-workflow🎯Skill

Automates quality control and preprocessing of raw sequencing reads using fastp, performing adapter trimming, quality filtering, and generating comprehensive QC reports for genomic data.

bio-read-qc-fastp-workflow

🎯bio-metagenomics-kraken🎯Skill

bio-metagenomics-kraken skill from gptomics/bioskills

bio-metagenomics-kraken

🎯bio-methylation-bismark-alignment🎯Skill

bio-methylation-bismark-alignment skill from gptomics/bioskills

bio-methylation-bismark-alignment

🎯bio-data-visualization-ggplot2-fundamentals🎯Skill

bio-data-visualization-ggplot2-fundamentals skill from gptomics/bioskills

bio-data-visualization-ggplot2-fundamentals

🎯bio-data-visualization-circos-plots🎯Skill

bio-data-visualization-circos-plots skill from gptomics/bioskills

bio-data-visualization-circos-plots

🎯bio-workflow-management-snakemake-workflows🎯Skill

bio-workflow-management-snakemake-workflows skill from gptomics/bioskills

bio-workflow-management-snakemake-workflows

🎯bio-de-deseq2-basics🎯Skill

bio-de-deseq2-basics skill from gptomics/bioskills

bio-de-deseq2-basics

🎯bio-pathway-reactome🎯Skill

bio-pathway-reactome skill from gptomics/bioskills

bio-pathway-reactome

🎯bio-reporting-rmarkdown-reports🎯Skill

bio-reporting-rmarkdown-reports skill from gptomics/bioskills

bio-reporting-rmarkdown-reports

🎯bio-epitranscriptomics-m6a-differential🎯Skill

bio-epitranscriptomics-m6a-differential skill from gptomics/bioskills

bio-epitranscriptomics-m6a-differential

🎯bio-data-visualization-color-palettes🎯Skill

Provides curated color palette recommendations and generation functions optimized for biological data visualization, ensuring perceptually uniform and colorblind-friendly color schemes for scientif...

bio-data-visualization-color-palettes

🎯bio-expression-matrix-metadata-joins🎯Skill

bio-expression-matrix-metadata-joins skill from gptomics/bioskills

bio-expression-matrix-metadata-joins

🎯bio-genome-intervals-gtf-gff-handling🎯Skill

bio-genome-intervals-gtf-gff-handling skill from gptomics/bioskills

bio-genome-intervals-gtf-gff-handling

🎯bio-longread-alignment🎯Skill

bio-longread-alignment skill from gptomics/bioskills

bio-longread-alignment

🎯bio-data-visualization-specialized-omics-plots🎯Skill

bio-data-visualization-specialized-omics-plots skill from gptomics/bioskills

bio-data-visualization-specialized-omics-plots

🎯bio-workflows-microbiome-pipeline🎯Skill

Generates reproducible microbiome data analysis workflows, automating sequence processing, taxonomic classification, diversity analysis, and statistical comparisons across microbiome samples using ...

bio-workflows-microbiome-pipeline

🎯bio-microbiome-diversity-analysis🎯Skill

bio-microbiome-diversity-analysis skill from gptomics/bioskills

bio-microbiome-diversity-analysis

🎯bio-workflows-genome-assembly-pipeline🎯Skill

bio-workflows-genome-assembly-pipeline skill from gptomics/bioskills

bio-workflows-genome-assembly-pipeline

🎯bio-pathway-enrichment-visualization🎯Skill

Generates pathway enrichment analysis visualizations by processing gene lists, performing statistical enrichment tests, and creating informative plots that highlight significant biological pathways...

bio-pathway-enrichment-visualization

🎯bio-pathway-go-enrichment🎯Skill

bio-pathway-go-enrichment skill from gptomics/bioskills

bio-pathway-go-enrichment

🎯bio-epitranscriptomics-merip-preprocessing🎯Skill

bio-epitranscriptomics-merip-preprocessing skill from gptomics/bioskills

bio-epitranscriptomics-merip-preprocessing

🎯bio-clinical-databases-variant-prioritization🎯Skill

bio-clinical-databases-variant-prioritization skill from gptomics/bioskills

bio-clinical-databases-variant-prioritization

🎯bio-rna-quantification-alignment-free-quant🎯Skill

bio-rna-quantification-alignment-free-quant skill from gptomics/bioskills

bio-rna-quantification-alignment-free-quant

🎯bio-workflows-clip-pipeline🎯Skill

bio-workflows-clip-pipeline skill from gptomics/bioskills

bio-workflows-clip-pipeline

🎯bio-read-alignment-bwa-alignment🎯Skill

bio-read-alignment-bwa-alignment skill from gptomics/bioskills

bio-read-alignment-bwa-alignment

🎯bio-data-visualization-heatmaps-clustering🎯Skill

bio-data-visualization-heatmaps-clustering skill from gptomics/bioskills

bio-data-visualization-heatmaps-clustering

🎯bio-spatial-transcriptomics-spatial-communication🎯Skill

bio-spatial-transcriptomics-spatial-communication skill from gptomics/bioskills

bio-spatial-transcriptomics-spatial-communication

🎯bio-workflows-expression-to-pathways🎯Skill

bio-workflows-expression-to-pathways skill from gptomics/bioskills

bio-workflows-expression-to-pathways

🎯bio-metabolomics-statistical-analysis🎯Skill

bio-metabolomics-statistical-analysis skill from gptomics/bioskills

bio-metabolomics-statistical-analysis

🎯bio-vcf-statistics🎯Skill

bio-vcf-statistics skill from gptomics/bioskills

bio-vcf-statistics

🎯bio-primer-design-qpcr-primers🎯Skill

bio-primer-design-qpcr-primers skill from gptomics/bioskills

bio-primer-design-qpcr-primers

🎯bio-copy-number-gatk-cnv🎯Skill

bio-copy-number-gatk-cnv skill from gptomics/bioskills

bio-copy-number-gatk-cnv

🎯bio-pdb-structure-io🎯Skill

bio-pdb-structure-io skill from gptomics/bioskills

bio-pdb-structure-io

🎯bio-workflows-methylation-pipeline🎯Skill

bio-workflows-methylation-pipeline skill from gptomics/bioskills

bio-workflows-methylation-pipeline

🎯bio-workflows-metagenomics-pipeline🎯Skill

Generates and executes end-to-end metagenomics analysis workflows, including sequence preprocessing, taxonomic classification, functional annotation, and microbiome diversity assessment using tools...

bio-workflows-metagenomics-pipeline

🎯bio-alignment-filtering🎯Skill

bio-alignment-filtering skill from gptomics/bioskills

bio-alignment-filtering

🎯bio-proteomics-quantification🎯Skill

bio-proteomics-quantification skill from gptomics/bioskills

bio-proteomics-quantification

🎯bio-proteomics-dia-analysis🎯Skill

bio-proteomics-dia-analysis skill from gptomics/bioskills

bio-proteomics-dia-analysis

🎯bio-proteomics-proteomics-qc🎯Skill

bio-proteomics-proteomics-qc skill from gptomics/bioskills

bio-proteomics-proteomics-qc

🎯bio-workflow-management-cwl-workflows🎯Skill

bio-workflow-management-cwl-workflows skill from gptomics/bioskills

bio-workflow-management-cwl-workflows

🎯bio-long-read-sequencing-clair3-variants🎯Skill

bio-long-read-sequencing-clair3-variants skill from gptomics/bioskills

bio-long-read-sequencing-clair3-variants

🎯bio-single-cell-batch-integration🎯Skill

bio-single-cell-batch-integration skill from gptomics/bioskills

bio-single-cell-batch-integration

🎯bio-workflows-imc-pipeline🎯Skill

bio-workflows-imc-pipeline skill from gptomics/bioskills

bio-workflows-imc-pipeline

🎯bio-batch-processing🎯Skill

bio-batch-processing skill from gptomics/bioskills

bio-batch-processing

🎯bio-rnaseq-qc🎯Skill

bio-rnaseq-qc skill from gptomics/bioskills

bio-rnaseq-qc

🎯bio-restriction-enzyme-selection🎯Skill

bio-restriction-enzyme-selection skill from gptomics/bioskills

bio-restriction-enzyme-selection

🎯bio-expression-matrix-counts-ingest🎯Skill

bio-expression-matrix-counts-ingest skill from gptomics/bioskills

bio-expression-matrix-counts-ingest

🎯bio-reporting-figure-export🎯Skill

bio-reporting-figure-export skill from gptomics/bioskills

bio-reporting-figure-export

🎯bio-atac-seq-footprinting🎯Skill

bio-atac-seq-footprinting skill from gptomics/bioskills

bio-atac-seq-footprinting

🎯bio-workflows-rnaseq-to-de🎯Skill

bio-workflows-rnaseq-to-de skill from gptomics/bioskills

bio-workflows-rnaseq-to-de

🎯bio-single-cell-multimodal-integration🎯Skill

Integrates and analyzes single-cell multimodal data from different biological modalities (e.g., RNA, ATAC, protein) to enable comprehensive cellular characterization and cross-modal feature alignment.

bio-single-cell-multimodal-integration

🎯bio-pdb-geometric-analysis🎯Skill

bio-pdb-geometric-analysis skill from gptomics/bioskills

bio-pdb-geometric-analysis

🎯bio-workflow-management-nextflow-pipelines🎯Skill

bio-workflow-management-nextflow-pipelines skill from gptomics/bioskills

bio-workflow-management-nextflow-pipelines

🎯bio-longread-qc🎯Skill

Performs quality control and preprocessing of long-read sequencing data, including read filtering, adapter trimming, and generating quality metrics for nanopore or PacBio sequencing datasets.

bio-longread-qc

🎯bio-read-qc-quality-reports🎯Skill

bio-read-qc-quality-reports skill from gptomics/bioskills

bio-read-qc-quality-reports

🎯bio-atac-seq-atac-peak-calling🎯Skill

bio-atac-seq-atac-peak-calling skill from gptomics/bioskills

bio-atac-seq-atac-peak-calling

🎯bio-spatial-transcriptomics-spatial-neighbors🎯Skill

bio-spatial-transcriptomics-spatial-neighbors skill from gptomics/bioskills

bio-spatial-transcriptomics-spatial-neighbors

🎯bio-workflows-tcr-pipeline🎯Skill

bio-workflows-tcr-pipeline skill from gptomics/bioskills

bio-workflows-tcr-pipeline

🎯bio-imaging-mass-cytometry-cell-segmentation🎯Skill

bio-imaging-mass-cytometry-cell-segmentation skill from gptomics/bioskills

bio-imaging-mass-cytometry-cell-segmentation

🎯bio-workflow-management-wdl-workflows🎯Skill

bio-workflow-management-wdl-workflows skill from gptomics/bioskills

bio-workflow-management-wdl-workflows

🎯bio-chip-seq-super-enhancers🎯Skill

bio-chip-seq-super-enhancers skill from gptomics/bioskills

bio-chip-seq-super-enhancers

🎯bio-clinical-databases-dbsnp-queries🎯Skill

bio-clinical-databases-dbsnp-queries skill from gptomics/bioskills

bio-clinical-databases-dbsnp-queries

🎯bio-variant-calling-joint-calling🎯Skill

bio-variant-calling-joint-calling skill from gptomics/bioskills

bio-variant-calling-joint-calling

🎯bio-workflows-scrnaseq-pipeline🎯Skill

bio-workflows-scrnaseq-pipeline skill from gptomics/bioskills

bio-workflows-scrnaseq-pipeline

🎯bio-metabolomics-xcms-preprocessing🎯Skill

bio-metabolomics-xcms-preprocessing skill from gptomics/bioskills

bio-metabolomics-xcms-preprocessing

🎯bio-workflows-chipseq-pipeline🎯Skill

bio-workflows-chipseq-pipeline skill from gptomics/bioskills

bio-workflows-chipseq-pipeline

🎯bio-restriction-sites🎯Skill

bio-restriction-sites skill from gptomics/bioskills

bio-restriction-sites

🎯bio-pathway-gsea🎯Skill

Performs gene set enrichment analysis (GSEA) to identify statistically significant biological pathways and functional annotations from genomic data

bio-pathway-gsea

🎯bio-geo-data🎯Skill

bio-geo-data skill from gptomics/bioskills

bio-geo-data

🎯bio-rna-quantification-count-matrix-qc🎯Skill

bio-rna-quantification-count-matrix-qc skill from gptomics/bioskills

bio-rna-quantification-count-matrix-qc

🎯bio-proteomics-spectral-libraries🎯Skill

Generates, processes, and analyzes mass spectrometry proteomics spectral libraries for protein identification and quantification in complex biological samples.

bio-proteomics-spectral-libraries

🎯bio-read-alignment-bowtie2-alignment🎯Skill

bio-read-alignment-bowtie2-alignment skill from gptomics/bioskills

bio-read-alignment-bowtie2-alignment

🎯bio-pathway-kegg-pathways🎯Skill

bio-pathway-kegg-pathways skill from gptomics/bioskills

bio-pathway-kegg-pathways

🎯bio-imaging-mass-cytometry-phenotyping🎯Skill

Analyzes high-dimensional single-cell protein expression data from mass cytometry experiments, enabling comprehensive cellular phenotyping and identification of distinct cell populations through ad...

bio-imaging-mass-cytometry-phenotyping

🎯bio-alignment-pairwise🎯Skill

bio-alignment-pairwise skill from gptomics/bioskills

bio-alignment-pairwise

🎯bio-bedgraph-handling🎯Skill

bio-bedgraph-handling skill from gptomics/bioskills

bio-bedgraph-handling

🎯bio-paired-end-fastq🎯Skill

bio-paired-end-fastq skill from gptomics/bioskills

bio-paired-end-fastq

🎯bio-methylation-dmr-detection🎯Skill

bio-methylation-dmr-detection skill from gptomics/bioskills

bio-methylation-dmr-detection

🎯bio-genome-intervals-bigwig-tracks🎯Skill

bio-genome-intervals-bigwig-tracks skill from gptomics/bioskills

bio-genome-intervals-bigwig-tracks

🎯bio-pathway-wikipathways🎯Skill

bio-pathway-wikipathways skill from gptomics/bioskills

bio-pathway-wikipathways

🎯bio-genome-assembly-scaffolding🎯Skill

bio-genome-assembly-scaffolding skill from gptomics/bioskills

bio-genome-assembly-scaffolding

🎯bio-format-conversion🎯Skill

bio-format-conversion skill from gptomics/bioskills

bio-format-conversion

🎯bio-entrez-link🎯Skill

bio-entrez-link skill from gptomics/bioskills

bio-entrez-link

🎯bio-clip-seq-clip-peak-calling🎯Skill

bio-clip-seq-clip-peak-calling skill from gptomics/bioskills

bio-clip-seq-clip-peak-calling

🎯bio-workflows-spatial-pipeline🎯Skill

bio-workflows-spatial-pipeline skill from gptomics/bioskills

bio-workflows-spatial-pipeline

🎯bio-alignment-sorting🎯Skill

bio-alignment-sorting skill from gptomics/bioskills

bio-alignment-sorting

🎯bio-proteomics-peptide-identification🎯Skill

bio-proteomics-peptide-identification skill from gptomics/bioskills

bio-proteomics-peptide-identification

🎯bio-alignment-io🎯Skill

bio-alignment-io skill from gptomics/bioskills

bio-alignment-io

🎯bio-multi-omics-mofa-integration🎯Skill

bio-multi-omics-mofa-integration skill from gptomics/bioskills

bio-multi-omics-mofa-integration

🎯bio-single-cell-doublet-detection🎯Skill

bio-single-cell-doublet-detection skill from gptomics/bioskills

bio-single-cell-doublet-detection

🎯bio-multi-omics-data-harmonization🎯Skill

bio-multi-omics-data-harmonization skill from gptomics/bioskills

bio-multi-omics-data-harmonization

🎯bio-expression-matrix-sparse-handling🎯Skill

bio-expression-matrix-sparse-handling skill from gptomics/bioskills

bio-expression-matrix-sparse-handling

🎯bio-multi-omics-similarity-network🎯Skill

bio-multi-omics-similarity-network skill from gptomics/bioskills

bio-multi-omics-similarity-network

🎯bio-sequence-properties🎯Skill

bio-sequence-properties skill from gptomics/bioskills

bio-sequence-properties

🎯bio-rna-quantification-tximport-workflow🎯Skill

bio-rna-quantification-tximport-workflow skill from gptomics/bioskills

bio-rna-quantification-tximport-workflow

🎯bio-genome-assembly-long-read-assembly🎯Skill

bio-genome-assembly-long-read-assembly skill from gptomics/bioskills

bio-genome-assembly-long-read-assembly

🎯bio-differential-expression-timeseries-de🎯Skill

bio-differential-expression-timeseries-de skill from gptomics/bioskills

bio-differential-expression-timeseries-de

🎯bio-hi-c-analysis-compartment-analysis🎯Skill

bio-hi-c-analysis-compartment-analysis skill from gptomics/bioskills

bio-hi-c-analysis-compartment-analysis

🎯bio-genome-intervals-bed-file-basics🎯Skill

bio-genome-intervals-bed-file-basics skill from gptomics/bioskills

bio-genome-intervals-bed-file-basics

🎯bio-motif-search🎯Skill

Searches biological sequence motifs across genomic datasets, identifying and extracting specific DNA, RNA, or protein sequence patterns using advanced bioinformatics algorithms and pattern matching...

bio-motif-search

🎯bio-entrez-search🎯Skill

Searches the NCBI Entrez database for biological sequences, publications, or other biomedical information using Python's Biopython library, allowing flexible querying and retrieval of scientific data.

bio-entrez-search

🎯bio-read-qc-contamination-screening🎯Skill

bio-read-qc-contamination-screening skill from gptomics/bioskills

bio-read-qc-contamination-screening

🎯bio-methylation-methylkit🎯Skill

bio-methylation-methylkit skill from gptomics/bioskills

bio-methylation-methylkit

🎯bio-clip-seq-clip-preprocessing🎯Skill

bio-clip-seq-clip-preprocessing skill from gptomics/bioskills

bio-clip-seq-clip-preprocessing

🎯bio-phasing-imputation-genotype-imputation🎯Skill

bio-phasing-imputation-genotype-imputation skill from gptomics/bioskills

bio-phasing-imputation-genotype-imputation

🎯bio-longread-structural-variants🎯Skill

bio-longread-structural-variants skill from gptomics/bioskills

bio-longread-structural-variants

🎯bio-multi-omics-mixomics-analysis🎯Skill

bio-multi-omics-mixomics-analysis skill from gptomics/bioskills

bio-multi-omics-mixomics-analysis

🎯bio-hi-c-analysis-tad-detection🎯Skill

bio-hi-c-analysis-tad-detection skill from gptomics/bioskills

bio-hi-c-analysis-tad-detection

🎯bio-hi-c-analysis-hic-data-io🎯Skill

bio-hi-c-analysis-hic-data-io skill from gptomics/bioskills

bio-hi-c-analysis-hic-data-io

🎯bio-rna-quantification-featurecounts-counting🎯Skill

bio-rna-quantification-featurecounts-counting skill from gptomics/bioskills

bio-rna-quantification-featurecounts-counting

🎯bio-workflows-crispr-screen-pipeline🎯Skill

bio-workflows-crispr-screen-pipeline skill from gptomics/bioskills

bio-workflows-crispr-screen-pipeline

🎯bio-flow-cytometry-bead-normalization🎯Skill

bio-flow-cytometry-bead-normalization skill from gptomics/bioskills

bio-flow-cytometry-bead-normalization

🎯bio-workflows-atacseq-pipeline🎯Skill

bio-workflows-atacseq-pipeline skill from gptomics/bioskills

bio-workflows-atacseq-pipeline

🎯bio-clip-seq-binding-site-annotation🎯Skill

bio-clip-seq-binding-site-annotation skill from gptomics/bioskills

bio-clip-seq-binding-site-annotation

🎯bio-clinical-databases-myvariant-queries🎯Skill

bio-clinical-databases-myvariant-queries skill from gptomics/bioskills

bio-clinical-databases-myvariant-queries

🎯bio-crispr-batch-correction🎯Skill

bio-crispr-batch-correction skill from gptomics/bioskills

bio-crispr-batch-correction

🎯bio-microbiome-functional-prediction🎯Skill

bio-microbiome-functional-prediction skill from gptomics/bioskills

bio-microbiome-functional-prediction

🎯bio-chipseq-differential-binding🎯Skill

bio-chipseq-differential-binding skill from gptomics/bioskills

bio-chipseq-differential-binding

🎯bio-variant-calling-structural-variant-calling🎯Skill

bio-variant-calling-structural-variant-calling skill from gptomics/bioskills

bio-variant-calling-structural-variant-calling

🎯bio-metagenomics-strain-tracking🎯Skill

bio-metagenomics-strain-tracking skill from gptomics/bioskills

bio-metagenomics-strain-tracking

🎯bio-imaging-mass-cytometry-quality-metrics🎯Skill

bio-imaging-mass-cytometry-quality-metrics skill from gptomics/bioskills

bio-imaging-mass-cytometry-quality-metrics

🎯bio-read-alignment-hisat2-alignment🎯Skill

bio-read-alignment-hisat2-alignment skill from gptomics/bioskills

bio-read-alignment-hisat2-alignment

🎯bio-population-genetics-association-testing🎯Skill

bio-population-genetics-association-testing skill from gptomics/bioskills

bio-population-genetics-association-testing

🎯bio-variant-normalization🎯Skill

bio-variant-normalization skill from gptomics/bioskills

bio-variant-normalization

🎯bio-genome-assembly-metagenome-assembly🎯Skill

bio-genome-assembly-metagenome-assembly skill from gptomics/bioskills

bio-genome-assembly-metagenome-assembly

🎯bio-ribo-seq-orf-detection🎯Skill

bio-ribo-seq-orf-detection skill from gptomics/bioskills

bio-ribo-seq-orf-detection

🎯bio-variant-calling-clinical-interpretation🎯Skill

bio-variant-calling-clinical-interpretation skill from gptomics/bioskills

bio-variant-calling-clinical-interpretation

🎯bio-gatk-variant-calling🎯Skill

bio-gatk-variant-calling skill from gptomics/bioskills

bio-gatk-variant-calling

🎯bio-imaging-mass-cytometry-interactive-annotation🎯Skill

bio-imaging-mass-cytometry-interactive-annotation skill from gptomics/bioskills

bio-imaging-mass-cytometry-interactive-annotation

🎯bio-hi-c-analysis-loop-calling🎯Skill

bio-hi-c-analysis-loop-calling skill from gptomics/bioskills

bio-hi-c-analysis-loop-calling

🎯bio-workflows-proteomics-pipeline🎯Skill

bio-workflows-proteomics-pipeline skill from gptomics/bioskills

bio-workflows-proteomics-pipeline

🎯bio-reference-operations🎯Skill

bio-reference-operations skill from gptomics/bioskills

bio-reference-operations

🎯bio-alignment-indexing🎯Skill

bio-alignment-indexing skill from gptomics/bioskills

bio-alignment-indexing

🎯bio-fastq-quality🎯Skill

bio-fastq-quality skill from gptomics/bioskills

bio-fastq-quality

🎯bio-genome-assembly-assembly-polishing🎯Skill

bio-genome-assembly-assembly-polishing skill from gptomics/bioskills

bio-genome-assembly-assembly-polishing

🎯bio-phasing-imputation-haplotype-phasing🎯Skill

bio-phasing-imputation-haplotype-phasing skill from gptomics/bioskills

bio-phasing-imputation-haplotype-phasing

🎯bio-seq-objects🎯Skill

bio-seq-objects skill from gptomics/bioskills

bio-seq-objects

🎯bio-metagenomics-metaphlan🎯Skill

bio-metagenomics-metaphlan skill from gptomics/bioskills

bio-metagenomics-metaphlan

🎯bio-single-cell-clustering🎯Skill

bio-single-cell-clustering skill from gptomics/bioskills

bio-single-cell-clustering

🎯bio-batch-downloads🎯Skill

bio-batch-downloads skill from gptomics/bioskills

bio-batch-downloads

🎯bio-spatial-transcriptomics-spatial-preprocessing🎯Skill

bio-spatial-transcriptomics-spatial-preprocessing skill from gptomics/bioskills

bio-spatial-transcriptomics-spatial-preprocessing

🎯bio-longread-medaka🎯Skill

bio-longread-medaka skill from gptomics/bioskills

bio-longread-medaka

🎯bio-expression-matrix-gene-id-mapping🎯Skill

bio-expression-matrix-gene-id-mapping skill from gptomics/bioskills

bio-expression-matrix-gene-id-mapping

🎯bio-tcr-bcr-analysis-immcantation-analysis🎯Skill

bio-tcr-bcr-analysis-immcantation-analysis skill from gptomics/bioskills

bio-tcr-bcr-analysis-immcantation-analysis

🎯bio-ribo-seq-translation-efficiency🎯Skill

bio-ribo-seq-translation-efficiency skill from gptomics/bioskills

bio-ribo-seq-translation-efficiency

🎯bio-tcr-bcr-analysis-vdjtools-analysis🎯Skill

bio-tcr-bcr-analysis-vdjtools-analysis skill from gptomics/bioskills

bio-tcr-bcr-analysis-vdjtools-analysis

🎯bio-atac-seq-motif-deviation🎯Skill

bio-atac-seq-motif-deviation skill from gptomics/bioskills

bio-atac-seq-motif-deviation

🎯bio-flow-cytometry-compensation-transformation🎯Skill

bio-flow-cytometry-compensation-transformation skill from gptomics/bioskills

bio-flow-cytometry-compensation-transformation

🎯bio-metabolomics-normalization-qc🎯Skill

Performs quality control and normalization of metabolomics data, handling batch effects, outlier detection, and data preprocessing to ensure reliable downstream analysis and interpretation of metab...

bio-metabolomics-normalization-qc

🎯bio-workflows-multiome-pipeline🎯Skill

bio-workflows-multiome-pipeline skill from gptomics/bioskills

bio-workflows-multiome-pipeline

🎯bio-reporting-quarto-reports🎯Skill

bio-reporting-quarto-reports skill from gptomics/bioskills

bio-reporting-quarto-reports

🎯bio-workflows-gwas-pipeline🎯Skill

bio-workflows-gwas-pipeline skill from gptomics/bioskills

bio-workflows-gwas-pipeline

🎯bio-epitranscriptomics-modification-visualization🎯Skill

bio-epitranscriptomics-modification-visualization skill from gptomics/bioskills

bio-epitranscriptomics-modification-visualization

🎯bio-phylo-distance-calculations🎯Skill

bio-phylo-distance-calculations skill from gptomics/bioskills

bio-phylo-distance-calculations

🎯bio-metagenomics-abundance🎯Skill

bio-metagenomics-abundance skill from gptomics/bioskills

bio-metagenomics-abundance

🎯bio-spatial-transcriptomics-spatial-visualization🎯Skill

bio-spatial-transcriptomics-spatial-visualization skill from gptomics/bioskills

bio-spatial-transcriptomics-spatial-visualization

🎯bio-restriction-mapping🎯Skill

bio-restriction-mapping skill from gptomics/bioskills

bio-restriction-mapping

🎯bio-proteomics-differential-abundance🎯Skill

bio-proteomics-differential-abundance skill from gptomics/bioskills

bio-proteomics-differential-abundance

🎯bio-data-visualization-interactive-visualization🎯Skill

Creates interactive, dynamic biological data visualizations using Python libraries like Plotly, Bokeh, or Altair, enabling researchers to explore complex datasets through zoomable, filterable, and ...

bio-data-visualization-interactive-visualization

🎯bio-chipseq-qc🎯Skill

Performs quality control and preprocessing of ChIP-seq data, including read alignment assessment, peak calling validation, and signal-to-noise ratio evaluation.

bio-chipseq-qc

🎯bio-pdb-structure-modification🎯Skill

bio-pdb-structure-modification skill from gptomics/bioskills

bio-pdb-structure-modification

🎯bio-single-cell-data-io🎯Skill

bio-single-cell-data-io skill from gptomics/bioskills

bio-single-cell-data-io

🎯bio-single-cell-markers-annotation🎯Skill

bio-single-cell-markers-annotation skill from gptomics/bioskills

bio-single-cell-markers-annotation

🎯bio-single-cell-lineage-tracing🎯Skill

bio-single-cell-lineage-tracing skill from gptomics/bioskills

bio-single-cell-lineage-tracing

🎯bio-single-cell-scatac-analysis🎯Skill

bio-single-cell-scatac-analysis skill from gptomics/bioskills

bio-single-cell-scatac-analysis

🎯bio-consensus-sequences🎯Skill

bio-consensus-sequences skill from gptomics/bioskills

bio-consensus-sequences

🎯bio-workflows-somatic-variant-pipeline🎯Skill

bio-workflows-somatic-variant-pipeline skill from gptomics/bioskills

bio-workflows-somatic-variant-pipeline

🎯bio-single-cell-cell-annotation🎯Skill

bio-single-cell-cell-annotation skill from gptomics/bioskills

bio-single-cell-cell-annotation

🎯bio-metagenomics-visualization🎯Skill

bio-metagenomics-visualization skill from gptomics/bioskills

bio-metagenomics-visualization

🎯bio-flow-cytometry-gating-analysis🎯Skill

bio-flow-cytometry-gating-analysis skill from gptomics/bioskills

bio-flow-cytometry-gating-analysis

🎯bio-chipseq-peak-annotation🎯Skill

bio-chipseq-peak-annotation skill from gptomics/bioskills

bio-chipseq-peak-annotation

🎯bio-genome-intervals-coverage-analysis🎯Skill

bio-genome-intervals-coverage-analysis skill from gptomics/bioskills

bio-genome-intervals-coverage-analysis

🎯bio-chip-seq-motif-analysis🎯Skill

bio-chip-seq-motif-analysis skill from gptomics/bioskills

bio-chip-seq-motif-analysis

🎯bio-de-visualization🎯Skill

bio-de-visualization skill from gptomics/bioskills

bio-de-visualization

🎯bio-reverse-complement🎯Skill

bio-reverse-complement skill from gptomics/bioskills

bio-reverse-complement

🎯bio-imaging-mass-cytometry-data-preprocessing🎯Skill

bio-imaging-mass-cytometry-data-preprocessing skill from gptomics/bioskills

bio-imaging-mass-cytometry-data-preprocessing

🎯bio-single-cell-perturb-seq🎯Skill

bio-single-cell-perturb-seq skill from gptomics/bioskills

bio-single-cell-perturb-seq

🎯bio-sequence-statistics🎯Skill

bio-sequence-statistics skill from gptomics/bioskills

bio-sequence-statistics

🎯bio-workflows-longread-sv-pipeline🎯Skill

bio-workflows-longread-sv-pipeline skill from gptomics/bioskills

bio-workflows-longread-sv-pipeline

🎯bio-single-cell-preprocessing🎯Skill

bio-single-cell-preprocessing skill from gptomics/bioskills

bio-single-cell-preprocessing

🎯bio-workflows-merip-pipeline🎯Skill

bio-workflows-merip-pipeline skill from gptomics/bioskills

bio-workflows-merip-pipeline

🎯bio-read-qc-umi-processing🎯Skill

bio-read-qc-umi-processing skill from gptomics/bioskills

bio-read-qc-umi-processing

🎯bio-duplicate-handling🎯Skill

bio-duplicate-handling skill from gptomics/bioskills

bio-duplicate-handling

🎯bio-flow-cytometry-cytometry-qc🎯Skill

bio-flow-cytometry-cytometry-qc skill from gptomics/bioskills

bio-flow-cytometry-cytometry-qc

🎯bio-metagenomics-functional-profiling🎯Skill

bio-metagenomics-functional-profiling skill from gptomics/bioskills

bio-metagenomics-functional-profiling

🎯bio-spatial-transcriptomics-spatial-deconvolution🎯Skill

bio-spatial-transcriptomics-spatial-deconvolution skill from gptomics/bioskills

bio-spatial-transcriptomics-spatial-deconvolution

🎯bio-crispr-screens-jacks-analysis🎯Skill

bio-crispr-screens-jacks-analysis skill from gptomics/bioskills

bio-crispr-screens-jacks-analysis

🎯bio-tcr-bcr-analysis-mixcr-analysis🎯Skill

bio-tcr-bcr-analysis-mixcr-analysis skill from gptomics/bioskills

bio-tcr-bcr-analysis-mixcr-analysis

🎯bio-workflows-hic-pipeline🎯Skill

bio-workflows-hic-pipeline skill from gptomics/bioskills

bio-workflows-hic-pipeline

🎯bio-metabolomics-targeted-analysis🎯Skill

bio-metabolomics-targeted-analysis skill from gptomics/bioskills

bio-metabolomics-targeted-analysis

🎯bio-long-read-sequencing-isoseq-analysis🎯Skill

bio-long-read-sequencing-isoseq-analysis skill from gptomics/bioskills

bio-long-read-sequencing-isoseq-analysis

🎯bio-chipseq-peak-calling🎯Skill

bio-chipseq-peak-calling skill from gptomics/bioskills

bio-chipseq-peak-calling

🎯bio-workflows-riboseq-pipeline🎯Skill

bio-workflows-riboseq-pipeline skill from gptomics/bioskills

bio-workflows-riboseq-pipeline

🎯bio-microbiome-differential-abundance🎯Skill

bio-microbiome-differential-abundance skill from gptomics/bioskills

bio-microbiome-differential-abundance

🎯bio-microbiome-qiime2-workflow🎯Skill

bio-microbiome-qiime2-workflow skill from gptomics/bioskills

bio-microbiome-qiime2-workflow

🎯bio-differential-expression-batch-correction🎯Skill

bio-differential-expression-batch-correction skill from gptomics/bioskills

bio-differential-expression-batch-correction

🎯bio-small-rna-seq-target-prediction🎯Skill

bio-small-rna-seq-target-prediction skill from gptomics/bioskills

bio-small-rna-seq-target-prediction

🎯bio-tcr-bcr-analysis-scirpy-analysis🎯Skill

Performs single-cell TCR and BCR repertoire analysis using Scirpy, enabling immune cell receptor profiling, clonotype identification, and repertoire diversity characterization from single-cell sequ...

bio-tcr-bcr-analysis-scirpy-analysis

🎯bio-vcf-manipulation🎯Skill

Manipulates and processes Variant Call Format (VCF) files by providing functions for filtering, parsing, annotating, and transforming genetic variant data with high-performance Python libraries.

bio-vcf-manipulation

🎯bio-variant-calling🎯Skill

bio-variant-calling skill from gptomics/bioskills

bio-variant-calling

🎯bio-read-sequences🎯Skill

bio-read-sequences skill from gptomics/bioskills

bio-read-sequences

🎯bio-hi-c-analysis-hic-visualization🎯Skill

bio-hi-c-analysis-hic-visualization skill from gptomics/bioskills

bio-hi-c-analysis-hic-visualization

🎯bio-metabolomics-metabolite-annotation🎯Skill

bio-metabolomics-metabolite-annotation skill from gptomics/bioskills

bio-metabolomics-metabolite-annotation

🎯bio-crispr-screens-crispresso-editing🎯Skill

bio-crispr-screens-crispresso-editing skill from gptomics/bioskills

bio-crispr-screens-crispresso-editing

🎯bio-workflows-metabolomics-pipeline🎯Skill

bio-workflows-metabolomics-pipeline skill from gptomics/bioskills

bio-workflows-metabolomics-pipeline

🎯bio-alignment-msa-parsing🎯Skill

bio-alignment-msa-parsing skill from gptomics/bioskills

bio-alignment-msa-parsing

🎯bio-imaging-mass-cytometry-spatial-analysis🎯Skill

bio-imaging-mass-cytometry-spatial-analysis skill from gptomics/bioskills

bio-imaging-mass-cytometry-spatial-analysis

🎯bio-flow-cytometry-fcs-handling🎯Skill

bio-flow-cytometry-fcs-handling skill from gptomics/bioskills

bio-flow-cytometry-fcs-handling

🎯bio-entrez-fetch🎯Skill

bio-entrez-fetch skill from gptomics/bioskills

bio-entrez-fetch

🎯bio-metabolomics-pathway-mapping🎯Skill

bio-metabolomics-pathway-mapping skill from gptomics/bioskills

bio-metabolomics-pathway-mapping

🎯bio-spatial-transcriptomics-spatial-multiomics🎯Skill

bio-spatial-transcriptomics-spatial-multiomics skill from gptomics/bioskills

bio-spatial-transcriptomics-spatial-multiomics

🎯bio-codon-usage🎯Skill

bio-codon-usage skill from gptomics/bioskills

bio-codon-usage

🎯bio-blast-searches🎯Skill

bio-blast-searches skill from gptomics/bioskills

bio-blast-searches

🎯bio-primer-design-primer-validation🎯Skill

bio-primer-design-primer-validation skill from gptomics/bioskills

bio-primer-design-primer-validation

🎯bio-genome-intervals-proximity-operations🎯Skill

bio-genome-intervals-proximity-operations skill from gptomics/bioskills

bio-genome-intervals-proximity-operations

🎯bio-restriction-fragment-analysis🎯Skill

bio-restriction-fragment-analysis skill from gptomics/bioskills

bio-restriction-fragment-analysis

🎯bio-uniprot-access🎯Skill

bio-uniprot-access skill from gptomics/bioskills

bio-uniprot-access

🎯bio-local-blast🎯Skill

bio-local-blast skill from gptomics/bioskills

bio-local-blast

🎯bio-clip-seq-clip-motif-analysis🎯Skill

bio-clip-seq-clip-motif-analysis skill from gptomics/bioskills

bio-clip-seq-clip-motif-analysis

🎯bio-small-rna-seq-differential-mirna🎯Skill

bio-small-rna-seq-differential-mirna skill from gptomics/bioskills

bio-small-rna-seq-differential-mirna

🎯bio-small-rna-seq-smrna-preprocessing🎯Skill

bio-small-rna-seq-smrna-preprocessing skill from gptomics/bioskills

bio-small-rna-seq-smrna-preprocessing

🎯bio-primer-design-primer-basics🎯Skill

bio-primer-design-primer-basics skill from gptomics/bioskills

bio-primer-design-primer-basics

🎯bio-genome-assembly-assembly-qc🎯Skill

bio-genome-assembly-assembly-qc skill from gptomics/bioskills

bio-genome-assembly-assembly-qc

🎯bio-pileup-generation🎯Skill

bio-pileup-generation skill from gptomics/bioskills

bio-pileup-generation

🎯bio-workflows-fastq-to-variants🎯Skill

Transforms raw sequencing FASTQ files into annotated genetic variant calls by performing quality control, alignment, variant calling, and optional functional annotation.

bio-workflows-fastq-to-variants

🎯bio-genome-assembly-short-read-assembly🎯Skill

bio-genome-assembly-short-read-assembly skill from gptomics/bioskills

bio-genome-assembly-short-read-assembly

🎯bio-variant-calling-filtering-best-practices🎯Skill

Guides AI agents through best practices for filtering and processing genetic variant calls, ensuring high-quality variant identification by applying rigorous statistical and computational filtering...

bio-variant-calling-filtering-best-practices

🎯bio-population-genetics-plink-basics🎯Skill

bio-population-genetics-plink-basics skill from gptomics/bioskills

bio-population-genetics-plink-basics

🎯bio-workflows-multi-omics-pipeline🎯Skill

Generates reproducible multi-omics data analysis workflows by integrating and processing different types of biological data (genomics, transcriptomics, proteomics) through a standardized computatio...

bio-workflows-multi-omics-pipeline

🎯bio-sra-data🎯Skill

bio-sra-data skill from gptomics/bioskills

bio-sra-data

🎯bio-flow-cytometry-doublet-detection🎯Skill

bio-flow-cytometry-doublet-detection skill from gptomics/bioskills

bio-flow-cytometry-doublet-detection

🎯bio-workflows-smrna-pipeline🎯Skill

bio-workflows-smrna-pipeline skill from gptomics/bioskills

bio-workflows-smrna-pipeline

🎯bio-metagenomics-amr-detection🎯Skill

Skill

bio-metagenomics-amr-detection

🎯bio-spatial-transcriptomics-spatial-statistics🎯Skill

Skill

bio-spatial-transcriptomics-spatial-statistics

🎯bio-sam-bam-basics🎯Skill

bio-sam-bam-basics skill from gptomics/bioskills

bio-sam-bam-basics

🎯bio-phylo-tree-manipulation🎯Skill

bio-phylo-tree-manipulation skill from gptomics/bioskills

bio-phylo-tree-manipulation

🎯bio-phylo-modern-tree-inference🎯Skill

bio-phylo-modern-tree-inference skill from gptomics/bioskills

bio-phylo-modern-tree-inference

🎯bio-population-genetics-scikit-allel-analysis🎯Skill

bio-population-genetics-scikit-allel-analysis skill from gptomics/bioskills

bio-population-genetics-scikit-allel-analysis

🎯bio-filter-sequences🎯Skill

bio-filter-sequences skill from gptomics/bioskills

bio-filter-sequences

🎯bio-copy-number-cnv-visualization🎯Skill

bio-copy-number-cnv-visualization skill from gptomics/bioskills

bio-copy-number-cnv-visualization

🎯bio-structural-biology-modern-structure-prediction🎯Skill

bio-structural-biology-modern-structure-prediction skill from gptomics/bioskills

bio-structural-biology-modern-structure-prediction

🎯bio-clip-seq-clip-alignment🎯Skill

bio-clip-seq-clip-alignment skill from gptomics/bioskills

bio-clip-seq-clip-alignment

🎯bio-vcf-basics🎯Skill

bio-vcf-basics skill from gptomics/bioskills

bio-vcf-basics

🎯bio-ribo-seq-ribosome-periodicity🎯Skill

bio-ribo-seq-ribosome-periodicity skill from gptomics/bioskills

bio-ribo-seq-ribosome-periodicity

🎯bio-de-results🎯Skill

bio-de-results skill from gptomics/bioskills

bio-de-results

🎯bio-clinical-databases-gnomad-frequencies🎯Skill

bio-clinical-databases-gnomad-frequencies skill from gptomics/bioskills

bio-clinical-databases-gnomad-frequencies

🎯bio-ribo-seq-ribosome-stalling🎯Skill

bio-ribo-seq-ribosome-stalling skill from gptomics/bioskills

bio-ribo-seq-ribosome-stalling

🎯bio-proteomics-protein-inference🎯Skill

bio-proteomics-protein-inference skill from gptomics/bioskills

bio-proteomics-protein-inference

🎯bio-spatial-transcriptomics-spatial-domains🎯Skill

bio-spatial-transcriptomics-spatial-domains skill from gptomics/bioskills

bio-spatial-transcriptomics-spatial-domains

🎯bio-proteomics-ptm-analysis🎯Skill

bio-proteomics-ptm-analysis skill from gptomics/bioskills

bio-proteomics-ptm-analysis

🎯bio-genome-intervals-interval-arithmetic🎯Skill

bio-genome-intervals-interval-arithmetic skill from gptomics/bioskills

bio-genome-intervals-interval-arithmetic

🎯bio-phasing-imputation-imputation-qc🎯Skill

bio-phasing-imputation-imputation-qc skill from gptomics/bioskills

bio-phasing-imputation-imputation-qc

🎯bio-compressed-files🎯Skill

bio-compressed-files skill from gptomics/bioskills

bio-compressed-files

🎯bio-population-genetics-population-structure🎯Skill

bio-population-genetics-population-structure skill from gptomics/bioskills

bio-population-genetics-population-structure

🎯bio-clinical-databases-clinvar-lookup🎯Skill

bio-clinical-databases-clinvar-lookup skill from gptomics/bioskills

bio-clinical-databases-clinvar-lookup

🎯bio-structural-biology-alphafold-predictions🎯Skill

bio-structural-biology-alphafold-predictions skill from gptomics/bioskills

bio-structural-biology-alphafold-predictions

🎯bio-microbiome-taxonomy-assignment🎯Skill

bio-microbiome-taxonomy-assignment skill from gptomics/bioskills

bio-microbiome-taxonomy-assignment

🎯bio-de-edger-basics🎯Skill

bio-de-edger-basics skill from gptomics/bioskills

bio-de-edger-basics

🎯bio-crispr-screens-screen-qc🎯Skill

bio-crispr-screens-screen-qc skill from gptomics/bioskills

bio-crispr-screens-screen-qc

🎯bio-microbiome-amplicon-processing🎯Skill

bio-microbiome-amplicon-processing skill from gptomics/bioskills

bio-microbiome-amplicon-processing

🎯bio-hi-c-analysis-contact-pairs🎯Skill

bio-hi-c-analysis-contact-pairs skill from gptomics/bioskills

bio-hi-c-analysis-contact-pairs

🎯bio-spatial-transcriptomics-spatial-data-io🎯Skill

bio-spatial-transcriptomics-spatial-data-io skill from gptomics/bioskills

bio-spatial-transcriptomics-spatial-data-io

🎯bio-atac-seq-atac-qc🎯Skill

bio-atac-seq-atac-qc skill from gptomics/bioskills

bio-atac-seq-atac-qc

🎯bio-hi-c-analysis-matrix-operations🎯Skill

bio-hi-c-analysis-matrix-operations skill from gptomics/bioskills

bio-hi-c-analysis-matrix-operations

🎯bio-variant-calling-deepvariant🎯Skill

bio-variant-calling-deepvariant skill from gptomics/bioskills

bio-variant-calling-deepvariant

🎯bio-workflows-cnv-pipeline🎯Skill

bio-workflows-cnv-pipeline skill from gptomics/bioskills

bio-workflows-cnv-pipeline

🎯bio-single-cell-trajectory-inference🎯Skill

bio-single-cell-trajectory-inference skill from gptomics/bioskills

bio-single-cell-trajectory-inference

🎯bio-flow-cytometry-differential-analysis🎯Skill

bio-flow-cytometry-differential-analysis skill from gptomics/bioskills

bio-flow-cytometry-differential-analysis

🎯bio-read-qc-adapter-trimming🎯Skill

bio-read-qc-adapter-trimming skill from gptomics/bioskills

bio-read-qc-adapter-trimming

🎯bio-write-sequences🎯Skill

bio-write-sequences skill from gptomics/bioskills

bio-write-sequences

🎯bio-copy-number-cnv-annotation🎯Skill

bio-copy-number-cnv-annotation skill from gptomics/bioskills

bio-copy-number-cnv-annotation

🎯bio-epitranscriptomics-m6a-peak-calling🎯Skill

bio-epitranscriptomics-m6a-peak-calling skill from gptomics/bioskills

bio-epitranscriptomics-m6a-peak-calling

🎯bio-proteomics-data-import🎯Skill

Imports and preprocesses proteomics data files from common mass spectrometry formats like mzML, mzXML, and raw files, handling data conversion, quality control, and initial parsing for downstream p...

bio-proteomics-data-import

🎯bio-crispr-screens-hit-calling🎯Skill

bio-crispr-screens-hit-calling skill from gptomics/bioskills

bio-crispr-screens-hit-calling

🎯bio-sequence-slicing🎯Skill

bio-sequence-slicing skill from gptomics/bioskills

bio-sequence-slicing

🎯bio-metabolomics-lipidomics🎯Skill

bio-metabolomics-lipidomics skill from gptomics/bioskills

bio-metabolomics-lipidomics

🎯bio-sequence-similarity🎯Skill

bio-sequence-similarity skill from gptomics/bioskills

bio-sequence-similarity

🎯bio-chipseq-visualization🎯Skill

bio-chipseq-visualization skill from gptomics/bioskills

bio-chipseq-visualization

🎯bio-copy-number-cnvkit-analysis🎯Skill

bio-copy-number-cnvkit-analysis skill from gptomics/bioskills

bio-copy-number-cnvkit-analysis

🎯bio-ribo-seq-riboseq-preprocessing🎯Skill

bio-ribo-seq-riboseq-preprocessing skill from gptomics/bioskills

bio-ribo-seq-riboseq-preprocessing

🎯bio-small-rna-seq-mirge3-analysis🎯Skill

bio-small-rna-seq-mirge3-analysis skill from gptomics/bioskills

bio-small-rna-seq-mirge3-analysis

🎯bio-phylo-tree-io🎯Skill

bio-phylo-tree-io skill from gptomics/bioskills

bio-phylo-tree-io

🎯bio-crispr-screens-mageck-analysis🎯Skill

bio-crispr-screens-mageck-analysis skill from gptomics/bioskills

bio-crispr-screens-mageck-analysis

🎯bio-variant-annotation🎯Skill

bio-variant-annotation skill from gptomics/bioskills

bio-variant-annotation

🎯bio-alignment-validation🎯Skill

bio-alignment-validation skill from gptomics/bioskills

bio-alignment-validation

🎯bio-phylo-tree-visualization🎯Skill

bio-phylo-tree-visualization skill from gptomics/bioskills

bio-phylo-tree-visualization

🎯bio-atac-seq-nucleosome-positioning🎯Skill

bio-atac-seq-nucleosome-positioning skill from gptomics/bioskills

bio-atac-seq-nucleosome-positioning

🎯bio-population-genetics-linkage-disequilibrium🎯Skill

bio-population-genetics-linkage-disequilibrium skill from gptomics/bioskills

bio-population-genetics-linkage-disequilibrium

🎯bio-tcr-bcr-analysis-repertoire-visualization🎯Skill

bio-tcr-bcr-analysis-repertoire-visualization skill from gptomics/bioskills

bio-tcr-bcr-analysis-repertoire-visualization

🎯bio-small-rna-seq-mirdeep2-analysis🎯Skill

bio-small-rna-seq-mirdeep2-analysis skill from gptomics/bioskills

bio-small-rna-seq-mirdeep2-analysis

🎯bio-read-qc-quality-filtering🎯Skill

bio-read-qc-quality-filtering skill from gptomics/bioskills

bio-read-qc-quality-filtering

🎯bio-crispr-library-design🎯Skill

bio-crispr-library-design skill from gptomics/bioskills

bio-crispr-library-design

🎯bio-epitranscriptomics-m6anet-analysis🎯Skill

bio-epitranscriptomics-m6anet-analysis skill from gptomics/bioskills

bio-epitranscriptomics-m6anet-analysis

🎯bio-spatial-transcriptomics-image-analysis🎯Skill

bio-spatial-transcriptomics-image-analysis skill from gptomics/bioskills

bio-spatial-transcriptomics-image-analysis

🎯bio-population-genetics-selection-statistics🎯Skill

bio-population-genetics-selection-statistics skill from gptomics/bioskills

bio-population-genetics-selection-statistics

🎯bio-single-cell-cell-communication🎯Skill

bio-single-cell-cell-communication skill from gptomics/bioskills

bio-single-cell-cell-communication

🎯bio-atac-seq-differential-accessibility🎯Skill

bio-atac-seq-differential-accessibility skill from gptomics/bioskills

bio-atac-seq-differential-accessibility

🎯bio-pdb-structure-navigation🎯Skill

bio-pdb-structure-navigation skill from gptomics/bioskills

bio-pdb-structure-navigation

🎯bio-transcription-translation🎯Skill

bio-transcription-translation skill from gptomics/bioskills

bio-transcription-translation

🎯bio-phasing-imputation-reference-panels🎯Skill

bio-phasing-imputation-reference-panels skill from gptomics/bioskills

bio-phasing-imputation-reference-panels

🎯bio-reporting-automated-qc-reports🎯Skill

bio-reporting-automated-qc-reports skill from gptomics/bioskills

bio-reporting-automated-qc-reports

🎯bio-genome-assembly-hifi-assembly🎯Skill

bio-genome-assembly-hifi-assembly skill from gptomics/bioskills

bio-genome-assembly-hifi-assembly

🎯bio-metabolomics-msdial-preprocessing🎯Skill

bio-metabolomics-msdial-preprocessing skill from gptomics/bioskills

bio-metabolomics-msdial-preprocessing

🎯bio-hi-c-analysis-hic-differential🎯Skill

bio-hi-c-analysis-hic-differential skill from gptomics/bioskills

bio-hi-c-analysis-hic-differential

🎯bio-workflows-cytometry-pipeline🎯Skill

Based on the context of the repository being a collection of bioinformatics skills and the skill's name "bio-workflows-cytometry-pipeline", I would infer that this skill: Automates preprocessing, ...

bio-workflows-cytometry-pipeline

🎯bio-long-read-sequencing-nanopore-methylation🎯Skill

bio-long-read-sequencing-nanopore-methylation skill from gptomics/bioskills

bio-long-read-sequencing-nanopore-methylation

🎯bio-crispr-screens-base-editing-analysis🎯Skill

bio-crispr-screens-base-editing-analysis skill from gptomics/bioskills

bio-crispr-screens-base-editing-analysis

🎯bio-data-visualization-volcano-customization🎯Skill

Customizes volcano plots for differential gene expression analysis, allowing fine-tuned visual representation of statistical significance and fold change across experimental datasets.

bio-data-visualization-volcano-customization

🎯bio-data-visualization-genome-browser-tracks🎯Skill

Generates and visualizes genomic data tracks for genome browsers, enabling researchers to plot and compare multiple data types like sequencing coverage, gene annotations, and variant locations acro...

bio-data-visualization-genome-browser-tracks

🎯bio-data-visualization-upset-plots🎯Skill

Creates upset plots to visualize complex intersections and overlaps between multiple biological datasets or gene sets, helping researchers understand shared and unique elements across different exp...

bio-data-visualization-upset-plots

🎯bio-experimental-design-batch-design🎯Skill

Guides researchers in designing and optimizing experimental batches by providing strategies to minimize batch effects, randomize sample allocation, and ensure statistical validity in biological exp...

bio-experimental-design-batch-design

🎯bio-experimental-design-multiple-testing🎯Skill

bio-experimental-design-multiple-testing skill from gptomics/bioskills

bio-experimental-design-multiple-testing

🎯bio-experimental-design-sample-size🎯Skill

bio-experimental-design-sample-size skill from gptomics/bioskills

bio-experimental-design-sample-size

🎯bio-alignment-files-bam-statistics🎯Skill

bio-alignment-files-bam-statistics skill from gptomics/bioskills

bio-alignment-files-bam-statistics

🎯bio-spatial-transcriptomics-spatial-proteomics🎯Skill

Guides AI agents in generating code for analyzing spatial transcriptomics and proteomics data, enabling computational mapping and integration of gene expression and protein localization within tiss...

bio-spatial-transcriptomics-spatial-proteomics

🎯bio-alignment-statistics🎯Skill

bio-alignment-statistics skill from gptomics/bioskills

bio-alignment-statistics

🎯bio-reporting-jupyter-reports🎯Skill

bio-reporting-jupyter-reports skill from gptomics/bioskills

bio-reporting-jupyter-reports

🎯bio-alignment-msa-statistics🎯Skill

Computes and analyzes multiple sequence alignment (MSA) statistics, including conservation scores, gap percentages, entropy, and phylogenetic diversity metrics across aligned biological sequences.

bio-alignment-msa-statistics

🎯bio-experimental-design-power-analysis🎯Skill

bio-experimental-design-power-analysis skill from gptomics/bioskills

bio-experimental-design-power-analysis

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