data-export-pdf
π―Skillfrom starlitnightly/omicverse
Exports complex scientific datasets from Omicverse to structured, publication-ready PDF reports with customizable visualization and formatting options.
Part of
starlitnightly/omicverse(24 items)
Installation
pip install -e .[tests]pip install -r requirements-latest.txtpip install -U omicverseMore from this repository10
Transforms and preprocesses data locally using pandas and numpy, compatible with all LLM providers, enabling cleaning, normalization, reshaping, and feature engineering.
Performs differential gene expression analysis on bulk RNA-seq data using DESeq2 within the Omicverse computational framework, identifying statistically significant gene expression changes between ...
data-stats-analysis skill from starlitnightly/omicverse
bulk-rna-seq-deconvolution-with-bulk2single skill from starlitnightly/omicverse
single-trajectory-analysis skill from starlitnightly/omicverse
single-cell-preprocessing-with-omicverse skill from starlitnightly/omicverse
single-cell-cellphonedb-communication-mapping skill from starlitnightly/omicverse
bulk-rna-seq-differential-expression-with-omicverse skill from starlitnightly/omicverse
single-cell-downstream-analysis skill from starlitnightly/omicverse
gsea-enrichment-analysis skill from starlitnightly/omicverse